Here is a list of all class members with links to the classes they belong to:
- f -
- failed_job_count()
: Bio::EnsEMBL::Hive::AnalysisStats
- failed_job_tolerance()
: Bio::EnsEMBL::Hive::Analysis
- fan_cache()
: Bio::EnsEMBL::Hive::AnalysisJob
- fetch()
: Bio::EnsEMBL::Hive::URLFactory
- fetch_all()
: Bio::EnsEMBL::Hive::DBSQL::BaseAdaptor
- fetch_all_by_analysis_id_status()
: Bio::EnsEMBL::Hive::DBSQL::AnalysisJobAdaptor
- fetch_all_by_pattern()
: Bio::EnsEMBL::Hive::DBSQL::AnalysisAdaptor
- fetch_all_finished_roles_with_unfinished_jobs()
: Bio::EnsEMBL::Hive::DBSQL::RoleAdaptor
- fetch_all_incomplete_jobs_by_role_id()
: Bio::EnsEMBL::Hive::DBSQL::AnalysisJobAdaptor
- fetch_all_unfinished_roles_of_dead_workers()
: Bio::EnsEMBL::Hive::DBSQL::RoleAdaptor
- fetch_by_analysis_id_and_input_id()
: Bio::EnsEMBL::Hive::DBSQL::AnalysisJobAdaptor
- fetch_by_dbID()
: Bio::EnsEMBL::Hive::DBSQL::BaseAdaptor
- fetch_by_logic_name_or_url()
: Bio::EnsEMBL::Hive::DBSQL::AnalysisAdaptor
- fetch_by_url_query()
: Bio::EnsEMBL::Hive::DBSQL::AnalysisAdaptor
, Bio::EnsEMBL::Hive::DBSQL::AnalysisJobAdaptor
- fetch_input()
: Bio::EnsEMBL::Hive::Process
, Bio::EnsEMBL::Hive::RunnableDB::DatabaseDumper
, Bio::EnsEMBL::Hive::RunnableDB::Dummy
, Bio::EnsEMBL::Hive::RunnableDB::FailureTest
, Bio::EnsEMBL::Hive::RunnableDB::FastaFactory
, Bio::EnsEMBL::Hive::RunnableDB::LongMult::AddTogether
, Bio::EnsEMBL::Hive::RunnableDB::LongMult::DigitFactory
, Bio::EnsEMBL::Hive::RunnableDB::LongMult::PartMultiply
, Bio::EnsEMBL::Hive::RunnableDB::MySQLTransfer
, Bio::EnsEMBL::Hive::RunnableDB::NotifyByEmail
, Bio::EnsEMBL::Hive::RunnableDB::SqlCmd
, Bio::EnsEMBL::Hive::RunnableDB::SqlHealthcheck
, Bio::EnsEMBL::Hive::RunnableDB::SystemCmd
- fetch_input_ids_for_job_ids()
: Bio::EnsEMBL::Hive::DBSQL::AnalysisJobAdaptor
- fetch_job_counts_hashed_by_status()
: Bio::EnsEMBL::Hive::DBSQL::AnalysisJobAdaptor
- fetch_last_unfinished_by_worker_id()
: Bio::EnsEMBL::Hive::DBSQL::RoleAdaptor
- fetch_overdue_workers()
: Bio::EnsEMBL::Hive::Queen
- fetch_param_hash()
: Bio::EnsEMBL::Hive::DBSQL::PipelineWideParametersAdaptor
- fetch_some_by_analysis_id_limit()
: Bio::EnsEMBL::Hive::DBSQL::AnalysisJobAdaptor
- fetch_structures_for_job_ids()
: Bio::EnsEMBL::Hive::DBSQL::AccumulatorAdaptor
- final_decision()
: Bio::EnsEMBL::Hive::Limiter
- finalize_role()
: Bio::EnsEMBL::Hive::DBSQL::RoleAdaptor
- find_all_by()
: Bio::EnsEMBL::Hive::Utils::Collection
- find_all_sql_schema_patches()
: Bio::EnsEMBL::Hive::DBSQL::SqlSchemaAdaptor
- find_available_meadow_responsible_for_worker()
: Bio::EnsEMBL::Hive::Valley
- find_one_by()
: Bio::EnsEMBL::Hive::Utils::Collection
- find_submodules()
: Bio::EnsEMBL::Hive::Utils
- from_date_to_seconds()
: Bio::EnsEMBL::Hive::DBSQL::CoreDBConnection
- from_seconds_to_date()
: Bio::EnsEMBL::Hive::DBSQL::CoreDBConnection