This class adds patient(s) from DICOM file(s) to fwData::SeriesDB. More...

#include <SeriesDB.hpp>

Inheritance diagram for fwGdcmIO::reader::SeriesDB:

Collaboration diagram for fwGdcmIO::reader::SeriesDB:

Public Types
typedef std::vector< std::shared_ptr< ::fwMedData::DicomSeries > >	DicomSeriesContainerType

typedef std::vector< std::string >	FilenameContainerType

typedef std::vector< std::string >	SupportedSOPClassContainerType

Public Types inherited from fwDataIO::reader::GenericObjectReader< ::fwMedData::SeriesDB >
typedef ::fwMedData::SeriesDB	DataType
	the object type related

Public Types inherited from fwDataIO::reader::IObjectReader
typedef std::function< void(std::uint64_t) >	ProgressCallback

typedef std::function< void() >	CancelCallback

typedef ::fwDataIO::reader::factory::Key	Key

Public Types inherited from fwCom::HasSignals
typedef std::shared_ptr< HasSignals >	sptr

typedef std::shared_ptr< const HasSignals >	csptr

Public Member Functions
virtual bool	isA (const std::string &type) const override

FWGDCMIO_API	SeriesDB (::fwDataIO::reader::IObjectReader::Key key)
	Constructor.

FWGDCMIO_API	~SeriesDB ()
	Destructor.

FWGDCMIO_API void	read () override
	Reads DICOM data from configured path and fills SeriesDB object.

FWGDCMIO_API void	readFromDicomSeriesDB (const ::fwMedData::SeriesDB::csptr &dicomSeriesDB, const ::fwServices::IService::sptr &notifier=::fwServices::IService::sptr())
	Reads DICOM data from DicomSeries and fills SeriesDB object. More...

FWGDCMIO_API void	readDicomSeries ()
	Reads DICOM data from configured path and fills SeriesDB object with DicomSeries.

FWGDCMIO_API bool	isDicomDirAvailable ()
	Return true if a dicomdir file can be read.

FWGDCMIO_API DicomSeriesContainerType &	getDicomSeries ()
	Return DicomSeries container.

const bool &	getDicomdirActivated () const
	Get Set whether the reader must use the dicomdir file or not.

void	setDicomdirActivated (const bool &isDicomdirActivated)
	Set Set whether the reader must use the dicomdir file or not.

const std::string &	getDicomFilterType () const
	Get Dicom filter type that must be applied prior to the reading process.

void	setDicomFilterType (const std::string &dicomFilterType)
	Set Dicom filter type that must be applied prior to the reading process.

const SupportedSOPClassContainerType &	getSupportedSOPClassContainer () const
	Get Supported SOP Class.

void	setSupportedSOPClassContainer (const SupportedSOPClassContainerType &supportedSOPClassContainer)
	Set Supported SOP Class.

const ::fwLog::Logger::sptr &	getLogger () const
	Get Logger.

void	setLogger (const ::fwLog::Logger::sptr &logger)
	Set Logger.

FWGDCMIO_API std::shared_ptr< ::fwJobs::IJob >	getJob () const override
	Getter for reader's job.

void	setBufferRotationEnabled (bool enabled)
	Enable buffer rotation.

Public Member Functions inherited from fwDataIO::reader::GenericObjectReader< ::fwMedData::SeriesDB >
	GenericObjectReader ()
	Constructor. Do nothing.

virtual std::string	extension () override

virtual	~GenericObjectReader ()
	Destructor. Do nothing.

virtual void	setObject (::fwTools::Object::sptr obj) override
	m_object setter. More...

virtual std::shared_ptr< DataType >	getConcreteObject ()
	m_object getter. More...

Public Member Functions inherited from fwDataIO::reader::IObjectReader
virtual FWDATAIO_API::fwTools::Object::sptr	getObject ()
	m_object getter. More...

virtual FWDATAIO_API void	setLocation (const ::fwData::location::ILocation::sptr _location)
	m_location setter. More...

virtual FWDATAIO_API::fwData::location::ILocation::sptr	getLocation ()
	m_location getter. More...

FWDATAIO_API void	cancel ()
	Requests reader abortion.

Public Member Functions inherited from fwCore::BaseObject
Public Member Functions inherited from fwData::location::enableFolder< ::fwDataIO::reader::IObjectReader >
	enableFolder (::fwDataIO::reader::IObjectReader *rw)
	constructor More...

void	setFolder (ILocation::PathType folder)
	Set folder filesystem path.

ILocation::PathType	getFolder ()
	Get folder filesystem path.

void	setRecursive (bool val)
	Set the flag if folder location is recursive.

bool	getRecursive ()
	Get the flag if folder location is recursive.

Public Member Functions inherited from fwData::location::enableMultiFiles< ::fwDataIO::reader::IObjectReader >
	enableMultiFiles (::fwDataIO::reader::IObjectReader *rw)
	constructor More...

void	setFiles (ILocation::VectPathType paths)
	Set file system paths.

ILocation::VectPathType	getFiles ()
	Get file system paths.

Public Member Functions inherited from fwCom::HasSignals
std::shared_ptr< SignalBase >	signal (const Signals::SignalKeyType &key) const

template<typename SignalType >
std::shared_ptr< SignalType >	signal (const Signals::SignalKeyType &key) const

template<typename SignalType >
std::shared_ptr< SignalType >	newSignal (const Signals::SignalKeyType &key)

Static Public Member Functions
static bool	isTypeOf (const std::string &type)

Static Public Member Functions inherited from fwDataIO::reader::GenericObjectReader< ::fwMedData::SeriesDB >
static bool	isTypeOf (const std::string &type)

static const std::string &	classname ()
	return full object's classname with its namespace, i.e. fwCore::BaseObject

Static Public Member Functions inherited from fwDataIO::reader::IObjectReader
static bool	isTypeOf (const std::string &type)

static const std::string &	leafClassname ()
	return object's classname without its namespace, i.e. BaseObject

static const std::string &	classname ()
	return object's classname without its namespace, i.e. BaseObject

Static Public Member Functions inherited from fwCore::BaseObject
static bool	isTypeOf (const std::string &type)

static const std::string &	leafClassname ()
	return object's classname without its namespace, i.e. BaseObject

static const std::string &	classname ()
	return object's classname without its namespace, i.e. BaseObject

Friends
template<class , class , class >
class	::fwTools::ClassFactory

class	::fwTools::Factory

Demangling methods
virtual const std::string &	getLeafClassname () const override
	return object's classname without its namespace, i.e. BaseObject

virtual const std::string &	getClassname () const override
	return full object's classname with its namespace, i.e. fwCore::BaseObject

static const std::string &	leafClassname ()
	return object's classname without its namespace, i.e. BaseObject

static const std::string &	classname ()
	return object's classname without its namespace, i.e. BaseObject

Additional Inherited Members
Protected Member Functions inherited from fwDataIO::reader::IObjectReader
FWDATAIO_API	IObjectReader ()
	Constructor. Do nothing.

virtual FWDATAIO_API	~IObjectReader ()
	Destructor. Do nothing.

Protected Member Functions inherited from fwCom::HasSignals
	HasSignals (const HasSignals &)
	Copy constructor forbidden.

HasSignals &	operator= (const HasSignals &)
	Copy operator forbidden.

Protected Attributes inherited from fwDataIO::reader::IObjectReader
::fwTools::Object::wptr	m_object
	Object result of reading process. More...

::fwData::location::ILocation::sptr	m_location
	Object location ( file path, directory path, url, etc )

Protected Attributes inherited from fwCom::HasSignals
Signals	m_signals

Detailed Description

This class adds patient(s) from DICOM file(s) to fwData::SeriesDB.

Definition at line 40 of file io/fwGdcmIO/include/fwGdcmIO/reader/SeriesDB.hpp.

Member Function Documentation

void fwGdcmIO::reader::SeriesDB::readFromDicomSeriesDB	(	const ::fwMedData::SeriesDB::csptr &	dicomSeriesDB,
		const ::fwServices::IService::sptr &	notifier = `::fwServices::IService::sptr()`
	)

Reads DICOM data from DicomSeries and fills SeriesDB object.

Parameters

[in]	dicomSeriesDB	SeriesDB containing DicomSeries that must be read
[in]	notifier	Service used to notify changes in SeriesDB

Definition at line 263 of file io/fwGdcmIO/src/fwGdcmIO/reader/SeriesDB.cpp.

References fwDicomIOFilter::helper::Filter::applyFilter(), and SLM_ASSERT.

Here is the call graph for this function:

The documentation for this class was generated from the following files:

Public Types

Public Member Functions

Static Public Member Functions

Friends

Demangling methods

Additional Inherited Members

Detailed Description

Member Function Documentation