EXPERIMENT

SUPPLEMENTARY DATA

DNA origami

サンプル

Custom DNA strands

Red colored sequence: responsible for attachment of AuNP
Blue: responsible for vertical connection of origami
Green: responsible for horizontal connection of origami
Custom DNA strands Sigma-Aldritch length
r-1t0g CGA TCT AAA GTT TTG TCG TCT TTT TGC GCC G 31
r-1t8e AGG CTT TTA CGA TAA AAA CCA AAA TTA AGA C GGAACCTCAGCC 43
r-1t16e AAC GCC ATT CAG CTC ATT TTT TAA ATG CAA AT 32
r-3t0g TAG TAA ATG AAT TTT CTG TAT GGG GTG AAT TT 32
r-3t8e GGT AAT AGC AAC ACT ATC ATA ACA TCA TTG T 31
r-3t16e TCC TGT AGT TGT TAA AAT TCG CAT TAA TGC C 31
r-5t0g AAA CAA CTT TCA ACA GTT TCA GCA ATT GTA T 31
r-5t8e CCA ATA CTC GCC AAA AGG AAT TAA ACT GGC T 31
r-5t16e TGA GCG AGA GCA AAT ATT TAA ATG ATC TAC A 31
r-7t0g AAT AGA AAG GAA CAA CTA AAG GAC TCC AAA A 31
r-7t8e TGA ATC CCG AAT ACC ACA TTC AAC GAA GAA AA GGAACCTCAGCC 44
r-7t16e GGA ACA AAA GAA AAG CCC CAA AAG AGT CTG G 31
r-1t2f ACA ATG ACC GGT CGC TGA GGC TTC GAT TAT A 31
r-1t10f CGA GCT TCA GGT CAG GAT TAG AGG CTA TAT T 31
r-1t18f ACC AGG CAG TTG GGA AGG GCG ATC TCA CAA T 31
r-3t2f CTT AAA CAC GCT TTT GCG GGA TCA ATA CAC T 31
r-3t10f CCC GAA AGC CTT TTG ATA AGA GGT ACA TTT C 31
r-3t18f CCA GCT TTG CTA TTA CGC CAG CTA TAG CTG T 31
r-5t2f CGG TTT ATA AAG ACA GCA TCG GAA AGG CAC CA 32
r-5t10f AAG CGG ATC TTA GAG CTT AAT TGG CGA ACG A 31
r-5t18f CAG TAT CGG CTG CAA GGC GAT TAG GGT ACC G GGAACCTCAGCC 43
r-7t2f AAA AGG CTT ACA GAG GCT TTG AGT AAA CGG G 31
r-7t10f GTC TTT ACA GCT CAA CAT GTT TTA TCA TTC CA 32
r-7t18f CCG TGC ATG GTT TTC CCA GTC ACG CAT GCC TG 32
r-1t2e GAT ATA TTA ACA ACC ATC GCC CAC CAA GAG AA 32
r-1t10e ACT CCA ACA AAG CGA ACC AGA CCG CAG CCT T 31
r-1t18e GCG CAA CTA AGC GCC ATT CGC CAA ACA AAC A GGAACCTCAGCC 43
r-3t2e TTA AAG GCG CTT GAT ACC GAT AGC CAG ACG T 31
r-3t10e TAA TTG CTA CTT CAA ATA TCG CGC CAG AGG G 31
r-3t18e GCC TCT TCC CGG CAC CGC TTC TGG TCT GGC CT 32
r-5t2e CAG CAG CGC AGC TTG CTT TCG AGA TTT TGC T GGGCCC 37
r-5t10e GCG GAT GGT GCA TCA AAA AGA TTA GAT AGC GT 32
r-5t18e GGG GAT GTG CCT CAG GAA GAT CGA TTA AAT G 31
r-7t2e GCA ACG GCC CAA AAG GAG CCT TTG GAG TGA G 31
r-7t10e AAT GCT GTC CTG ACT ATT ATA GTA TAT TCA T 31
r-7t18e AAC GCC AGC TGC CAG TTT GAG GGT CTC CGT G 31
r-1t4f CCA AGC GCG CCT GAT AAA TTG TGC CCT GAC G 31
r-1t12f TTC ATT TGA CTA ATA GTA GTA GCA GAG AAA GG 32
r-1t20f TCC ACA CAT GGG GTG CCT AAT GAT GCC CCA G 31
r-3t4f AAA ACA CTG CTC CAT GTT ACT TAA CAA AGC T 31
r-3t12f GCA AAT GGC ATA CAG GCA AGG CAA GAG TAA TG 32
r-3t20f TTC CTG TGT AAT TGC GTT GCG CTA GAG AGT T 31
r-5t4f ACC TAA AAG ACG GTC AAT CAT AAA GAA CCG GGGAACCTCAGCC 43
r-5t12f GTA GAT TTA GCA ATA AAG CCT CAT AGA ACC C 31
r-5t20f AGC TCG AAG TCG GGA AAC CTG TCG ACA GCT GA 32
r-7t4f TAA AAT ACA ACT TTG AAA GAG GAC TGG CTG AC 32
r-7t12f TAT AAC AGC GGT TGT ACC AAA AAG CCT TTA T 31
r-7t20f CAG GTC GAG AAT CGG CCA ACG CGG GTG GTT T 31
r-1t4e GTA TCA TCG AAA CAA AGT ACA ACC GCC GCC A 31
r-1t12e TCA ATT CTG GGC GCG AGC TGA AAT CAT TAC C 31
r-1t20e GTA AAG CCA CAT ACG AGC CGG AAG ATC AGA TG GGAACCTCAGCC 44
r-3t4e CGC GAC CTC ATC TTT GAC CCC CAG GCA GGG AG 32
r-3t12e CAA TAA ATT CAA TAA CCT GTT TAA GTA CCT T 31
r-3t20e ACT CAC ATT GAA ATT GTT ATC CGC GGT GCG G 31
r-5t4e GAG GCG CAC GAA AGA GGC AAA AGG TCA CCC T 31
r-5t12e CAA AAT TAA GTT TGA CCA TTA GAT CAT TTT T 31
r-5t20e GCT TTC CAT TCG TAA TCA TGG TCG GCG AAA G 31
r-7t4e AAC TGA CCG TAA TGC CAC TAC GAC GAG GGT A 31
r-7t12e AGC TAA ATT TGA TTC CCA ATT CTC TGA ATA T 31
r-7t20e GCA TTA ATC TCT AGA GGA TCC CCA GTT GGG T GGAACCTCAGCC 43
r-1t6f AGA AAC ACT TTA ATT TCA ACT TTA CCT CGT TT 32
r-1t14f CCG GAG ACG TTC TAG CTG ATA AAT TAA ATT T 31
r-1t22f CAG GCG AAA AAA TCC CTT ATA AAT AGC GGT C 31
r-3t6f GCT CAT TCT TAT GCG ATT TTA AGC GAG GCA T 31
r-3t14f TGT AGG TAT AGC TAT TTT TGA GAT GTA AAC G 31
r-3t22f GCA GCA AGA GAT AGG GTT GAG TGT AAA GGA GC 32
r-5t6f ATA TTC ATC AGT CAG GAC GTT GGT AAT GCA G GGAACCTCAGCC 43
r-5t14f TCA TAT ATC AGG TCA TTG CCT GAA CAG GAA G 31
r-5t22f TTG CCC TTA AGA GTC CAC TAT TAG AAC GTG G 31
r-7t6f CTT CAT CAT AAT AAA ACG AAC TAA TCA GTT G 31
r-7t14f TTC AAC GCA GAG AAT CGA TGA ACG ACC CCG GT 32
r-7t22f TTC TTT TCA CGT CAA AGG GCG AAC CCG ATT T 31
r-1t6e TGA GAT GGC AGA ACG AGT AGT AAC ATT ACC A GGAACCTCAGCC 43
r-1t14e ATT CAA CCA GTC AAA TCA CCA TCT TTT CGA G 31
r-1t22e AAA TCG GCA ATC CTG TTT GAT GGC AAA CCC T 31
r-3t6e GAA TTA CCA GTG AAT AAG GCT TGT CGA AAT C 31
r-3t14e GGA GAG GGA AGA TTC AAA AGG GTT TAA CAT C 31
r-3t22e ATA GCC CGC GGT CCA CGC TGG TTG TGA GCT A 31
r-5t6e CAT TAT ACT ACC CAA ATC AAC GTA GCC GGA AC 32
r-5t14e AAG GCT ATT TTA AAT GCA ATG CCT AGA ATT AG 32
r-5t22e TTT GGA ACC ACC GCC TGG CCC TGC ACT GCC C 31
r-7t6e ATC TAC GTA GAG TAA TCT TGA CAG GGA ACC G 31
r-7t14e AGC AAA CAA AGG ATA AAA ATT TTG AGC ATA A 31
r-7t22e GGA CTC CAA CCA GTG AGA CGG GCA TGC CAG CT 32
r-1t8f ACC AGA CGG CAA AAG AAG TTT TGT TTT AAT T 31
r-1t16f TTG TTA AAC AAA AAT AAT TCG CGT GCC GGA A 31
r-1t24h ACG CTG CGC GTA ACC ACC ACA CCC ACG ACC AG 32
r-3t8f AGT AAG AGT AAA ATG TTT AGA CTG AGA GGA AG 32
r-3t16f TTA ATA TTC CAG CTT TCA TCA ACC ACT CCA G 31
r-3t24h GGG CGC TAG GGC GCT GGC AAG TGT CAA AAG A 31
r-5t8f ATA CAT AAG CGG AAT CGT CAT AAC AGA AGC A 31
r-5t16f ATT GTA TAT AAC AAC CCG TCG GAT GAC GAC GA GGAACCTCAGCC 44
r-5t24h GGGCCC CGA GAA AGG AAG GGA AGA AAG CGT GTT CCA G 37
r-7t8f AGA TTT AGC CTC AAA TGC TTT AAA AAA TCA G 31
r-7t16f TGA TAA TCC GGC GGA TTG ACC GTC ATC GTA A 31
r-7t24h AGA GCT TGA CGG GGA AAG CCG GCA AGA ACG T 31
r1t0g ATT CCA CAG ACA GCC CTC ATA GTT AGC GTA A 31
r1t8e GAA TAC CCA CGC AGT ATG TTA GCG AAT TAG A 31
r1t16e TAT ATA ACA AGA CAA AGA ACG CGA CAA CGC C 31
r3t0g TCG TCA CCA GTA CAA ACT ACA ACG CTC AGT AC 32
r3t8e AGA AGG AAT ACA TAA AGG TGG CAA ATT ATC A 31
r3t16e CTA CCT TTT ATA TTT TAG TTA ATT AGT AGG GC 32
r5t0g AAT AGG AAC CCA TGT ACC GTA ACG GGT TGA T 31
r5t8e AAA AGT AAC AAA GAC ACC ACG GAA AAA TAT TGGGAACCTCAGCC 44
r5t16e GTG AAT TTA TTT AAT GGT TTG AAA AAT TCT T 31
r7t0g CAC CAC CCT CAT TTT CAG GGA TAA TCA CCG T 31
r7t8e GCA ATA GCC AAT CAA TAG AAA ATG CGA CAT T 31
r7t16e AGC TTA GAA AAT AAG GCG TTA AAA AAA GCC T 31
r1t2f GGA TTA GGA GAG GCT GAG ACT CCT GCA TAA CC 32
r1t10f TAC AGA GAG TCA AAA ATG AAA ATA GGA AGC AA 32
r1t18f TCA AGA AAA AAA GAA GAT GAT GAT TCA GGC T GGAACCTCAGCC 43
r3t2f CAG GCG GAG AAC CTA TTA TTC TGG TCA GAC G 31
r3t10f GCA TTA GAA ATC CAA ATA AGA AAA TAT AGA A 31
r3t18f TTC ATT TGG AGG CGA ATT ATT CAT GAT TGT T 31
r5t2f ATA AGT ATT ATA AAC AGT TAA TGA TAA ATC C 31
r5t10f GAA CAA AGT TAC AAA ATA AAC AGC GAG GCG T 31
r5t18f GTA CAT AAT TGC TTT GAA TAC CAA AAG GGT TA 32
r7t2f ACT CAG GAA CGG GGT CAG TGC CTG CAG TCT C 31
r7t10f TCA GAG AGA CGA GCG TCT TTC CAG GAG GTT T 31
r7t18f CTT GCT TCC ATC GGG AGA AAC AAT GCA CGT AGGAACCTCAGCC 43
r1t2e AAG TAT TAA TTA GCG GGG TTT TGC CTG TAG C 31
r1t10e TGT TTA ACG AAT AAC ATA AAA ACT AAT AAC G 31
r1t18e ACC TGA GCA CAA AAT TAA TTA CAT GGT TGG GT 32
r3t2e CTA TTT CGT AAG TGC CGT CGA GAA CTG AGT T GGGCCC 37
r3t10e TTT ATC CCC GGG AGA ATT AAC TGA AGT TAC C 31
r3t18e ATC GCG CAA ATT ACC TTT TTT AAC TGA GAG A 31
r5t2e AGT GCC CGA GCC CGG AAT AGG TGT GCA AGC CC 32
r5t10e TTT GCC AGT CAG AGG GTA ATT GAG TTT TTA AG 32
r5t18e TCG CCT GAA TCA ATA TAT GTG AGA GTC AAT A 31
r7t2e AAG TTT TAG GTT TAG TAC CGC CAC TCA GAG C 31
r7t10e CAA CGC TAA TAA CCC ACA AGA ATA TGA AAT A 31
r7t18e ACC TTT TAT GTA AAT CGT CGC TAA TAG CGA T 31
r1t4f GCA TTG ACG AAC CAC CAC CAG AGC GGA GAT TT 32
r1t12f GCG CCC AAT TTT CAT CGT AGG AAA GGT GGC A 31
r1t20f ATG GCA ATA TCA TAT TCC TGA TTC ATA AAG T 31
r3t4f ATT GGC CTC TCA GAG CCA CCA CCA ATG AAA C 31
r3t12f GGC TTA TCG CAC TCA TCG AGA ACC CGA CAA A 31
r3t20f TGG ATT ATA CAA AGA AAC CAC CAG AAT CAA CA 32
r5t4f TCA TTA AAC CTC AGA GCC GCC ACG TAG CGA C 31
r5t12f TTT AGC GAC ATT CCA AGA ACG GGG ACG ACA A 31
r5t20f GAA CCT ACA AAA GTT TGA GTA ACA TCT AAA A 31
r7t4f TGA ATT TAC CGG AAC CAG AGC CAC AGA CTG TGGAACCTCAGCC 43
r7t12f TGA AGC CTA ACC AAT CAA TAA TCA GAA CGC G 31
r7t20f AAA CAG AAT TAA ATC CTT TGC CCA ATA GAT T 31
r1t4e CGC CAC CAA GGA GGT TGA GGC AGA AAC ATG A 31
r1t12e CGT TTT TAT AGC AAG CAA ATC AGC GAT TTT T 31
r1t20e GAA TTA TCT CAT CAA TAT AAT CCT TTC AAT T 31
r3t4e CCG CCA CCT GAT ATT CAC AAA CAA CCC CCT GC 32
r3t12e CAA GTA CCC GGT ATT CTA AGA ACG CCA TAT TA 32
r3t20e TTT GCG GAA CTT CTG AAT AAT GGG TTA CAA A 31
r5t4e ACC GCC TCG CCA GAA TGG AAA GCT GAG TAA C 31
r5t12e TTC CTT ATA CCT CCC GAC TTG CGG AGC CTA A 31
r5t20e TTA ATT TTC ATA TCA AAA TTA TTT AAC GGA TGGAACCTCAGCC 43
r7t4e CAA AAT CAC CGT TCC AGT AAG CGC TGG TAA T 31
r7t12e CAT GTA GAT AAA TCA AGA TTA GTT AAT CTT AC 32
r7t20e AAC TCG TAA TAA AGA AAT TGC GTA GTA ACA GT 32
r1t6f TTA GCA AGA ATC ACC AGT AGC ACA TTG GGC TGGAACCTCAGCC 43
r1t14f CCA GTA ATA TTT AGG CAG AGG CAA ATA TGA T 31
r1t22f CAA TCA ATC TGA ACC TCA AAT ATT GGT TCC G 31
r3t6f CAT CGA TAG ACT TGA GCC ATT TGG AAA CGT AG 32
r3t14f AGG TAA AGG AAT CGC CAT ATT TAA GAA AAC T 31
r3t22f GTT GAA AGC AGC AAA TGA AAA ATA CAG AGA T 31
r5t6f AGA ATC AAT ATT CAT TAA AGG TGA CAT ATA A 31
r5t14f TAA ACA ACA AAG CCA ACG CTC AAC TCA TCT TC 32
r5t22f TAT CTT TAA CCG CCT GCA ACA GTG TAA GAA TA 32
r7t6f AGC GCG TTT GAG GGA GGG AAG GTT AAG TTT A GGAACCTCAGCC 43
r7t14f CCT GTT TAT CAT ATG CGT TAT ACA TAC CGA C 31
r7t22f AGA GCC GTA TAA AAC AGA GGT GAA TGG CTA T 31
r1t6e GCC AGC AAG CCG GAA ACG TCA CCC TCA GAG C 31
r1t14e AAC ATG TAA AGA GAA TAT AAA GTA AAG CAA GC 32
r1t22e TCA CCT TGA TCT GGT CAG TTG GCA AAG GAG CG 32
r3t6e CCG TCA CCG CAG CAC CGT AAT CAC CTC AGA A 31
r3t14e TTA ATT GAT AAT TCT GTC CAG ACT ATT AAA C 31
r3t22e AGA GCC AGG AAT TGA GGA AGG TTA TTA TCA T 31
r5t6e ACG GAA ATG TTT GCC TTT AGC GTC CAC CGG A 31
r5t14e ACC AGT ATA TGT TCA GCT AAT GCG GCT GTC T 31
r5t22e GTA TTA ACG GAG CAC TAA CAA CTG AAC GTT A 31
r7t6e CAA CCG ATT TCA TCG GCA TTT TCG TTC ATA AT 32
r7t14e GTT TAG TAT CAA CAA TAG ATA AGT TTA CGA G 31
r7t22e AGC AGA AGC AAT AGA TAA TAC ATA ATT CGA C 31
r1t8f TCC TTA TTA AAA GAA CTG GCA TGA TAG CGA G 31
r1t16f CCA ATC GCT ATA TGT AAA TGC TGC CAA TAG G 31
r1t24h TAA TAA AAG GGA CAT TCT GGC CAC TAA AGC A 31
r3t8f AAA ATA CAA CCG AGG AAA CGC AAA GGG AAG C 31
r3t16f TTT TCA AAT TAA CCT CCG GCT TAT TAA CAA T 31
r3t24h AGA ACC CTT CTG ACC TGA AAG CGC CAC GCT G 31
r5t8f AAG AAA CGG CAG ATA GCC GAA CAA ACA CCC T 31
r5t16f TGA CCT AAA TCA AAA TCA TAG GTT GGA AAC A 31
r5t24h GGGCCCCGT GGC ACA GAC AAT ATT TTT GAG GCG GTC A 37
r7t8f TTT TGT CAT ATC TTA CCG AAG CCC CGC TAA TA 32
r7t16f CGT GTG ATT TAA GAC GCT GAG AAG TGA ATA AC GGAACCTCAGCC 44
r7t24h TAG TCT TTA ATG CGC GAA CTG ATA GAA CCA CC 32
r9t0i TTT TCC TCA GAA CCG CCA CCC CCT CAG A 28
r9t16f AAC ACC GGT TTT TAG AAT CCT TGA AAA CTT AAT TAA 36
r-9t10e ACT AAA GTT TTT GAA TGA CCA TAA ATC AAC AGT TCA 36
Rem1 TAT TTA CAT TGG CAG ATT CAC CAG TCA C 28
Rem9 GCG TAC TAT GGT TGC TTT GAC GAG CAC 27
r9t2f ACC GCC ACT TTT ATG ATA CAG GAG TGT ATC ATA CAT 36
r9t18f TTT TCC CTT TTT GTC AGA TGA ATA TAC AGA TTT TCA 36
r-9t12e CCC TGT AAT TTT ACG GTG TCT GGA AGT TAA TAT GCA 36
Rem2 TTT TGA CGC TCA ATC GTC TGA AAT GGA T 28
Rem10 GTA TAA CGT GCT TTC CTC GTT AGA ATC 27
r9t4f GGC TTT TGT TTT TAG CGT TTG CCA TCT TGT CAT AGC 36
r9t20f GGT TTA ACT TTT ATT AGA CTT TAC AAA CTT GAG GAT 36
r-9t14e AAA ACT AGT TTT TAC TTT TGC GGG AGA ACA TTA TGA 36
Rem3 AGG AAA AAC GCT CAT GGA AAT ACC TAC A 28
Rem11 AGA GCG GGA GCT AAA CAG GAG GCC GAT 27
r9t6f CCC CTT ATT TTT CGC CAA AGA CAA AAG GTC ATA TGG AAAAAAGGAACC 48
r9t22j TTA GAA GTT TTT ATT AAA AAT ACC GAA CGC CCT AAA ACA TCG CCT TTT 48
r-9t16e AGG TCA CGT TTT CAT GTC AAT CAT ATG TGT AAT CGT 36
Rem4 AAC AAT ATT ACC GCC AGC CAT TGC AAC 27
Rem12 TAA AGG GAT TTT AGA CAG GAA CGG TAC 27
r9t8f TTT ACC AGT TTT ATA AGA GCA AGA AAC ATG AGT TAA 36
r-9t2i ACT TTT TCT TTT TTT TCA CGT TGA AAA TAT TGC GAA TAA TAA TTT TTT 48
r-9t18e GGAACC T TTT TTG GTG TAG ATG GGC GAA TGG GAT 34
Rem5 ACT ATC GGC CTT GCT GGT AAT ATC CAG 27
Rem13 GCC AGA ATC CTG AGA AGT GTT TTT ATA 27
r9t10f GCC CAA TAT TTT CTA CAA TTT TAT CCT GGC TAT TTT 36
r-9t4e GGT GTA CAT TTT ATG AGG AAG TTT CCA TGA CTA AAG 36
r-9t20e GGC GGT TTT TTT GCC AGT GCC AAG CTT GAC GTT GTA 36
Rem6 ATC ACT TGC CTG AGT AGA AGA ACT CAA 27
Rem14 ATC AGT GAG GCC ACC GAG TAA AAG AGT 27
r9t12f GCA CCC AGT TTT TAA TAT CCC ATC CTA ATC CTG AAC 36
r-9t6e GGAACC T TTT GAC CAG GCG CAT AGG CAG ATG AAC 34
r-9t22e TAT CAC GGT TTT GCG TAT TGG GCG CCA GCG GGG AGA 36
Rem7 AGC AAT ACT TCT TTG ATT AGT AAT AAC 27
Rem15 CTG TCC ATC ACG CAA ATT AAC CGT TGT 27
r9t14f AAG AAA AAT TTT AAT CAT AAT TAC TAG ATA AGA ATA AAAAAAGGAACC 48
r-9t8e GAA AAC GAT TTT ACA GGT AGA AAG ATT CAC GGA ACA 36
r-9t24j TTT TAA CCC TAA AGG GAG CCA AAC CGT C 28
Rem8 GCC GCG CTT AAT GCG CCG CTA CAG GGC 27

Glue sequence strands

Glue sequence strands Sequence Length
Glue1 TTGGCCTT 8
Glue2 CGGGCCCG 8

Strand for AuNP-oligo conjugate

Strand for AuNP-oligo conjugate
Nanoanchor S - GGCTGAGGTTCC 12 5'end phosphorothioate