Bio::EnsEMBL::Hive::AnalysisCtrlRule Class Reference

Inheritance diagram for Bio::EnsEMBL::Hive::AnalysisCtrlRule:

Collaboration diagram for Bio::EnsEMBL::Hive::AnalysisCtrlRule:

Public Member Functions
public	unikey ()
public String	condition_analysis_url ()
public Bio::EnsEMBL::Hive::Analysis	condition_analysis ()
public String	toString ()
Public Member Functions inherited from Bio::EnsEMBL::Hive::Cacheable
public	collection ()
public	unikey ()
public	add_new_or_update ()
Public Member Functions inherited from Bio::EnsEMBL::Hive::Storable
public Bio::EnsEMBL::Hive::Storable	new ()
public Int	dbID ()
public Bio::EnsEMBL::Hive::DBSQL::BaseAdaptor	adaptor ()
public	DESTROY ()
public	AUTOLOAD ()

Detailed Description

Description

    An 'analysis control rule' is a high level blocking control structure where there is
    a 'ctrled_analysis' which is 'BLOCKED' from running until all of its 'condition_analysis' are 'DONE'.
    If a ctrled_analysis requires multiple analysis to be DONE before it can run, a separate
    AnalysisCtrlRule must be created/stored for each condtion analysis.

    Allows the 'condition' analysis to be specified with a network savy URL like
    mysql://ensadmin:\@ecs2:3361/compara_hive_test?analysis.logic_name='blast_NCBI34'

Member Function Documentation

condition_analysis()

public Bio::EnsEMBL::Hive::Analysis Bio::EnsEMBL::Hive::AnalysisCtrlRule::condition_analysis

(

)

    Arg[1]  : (optional) Bio::EnsEMBL::Hive::Analysis object
    Usage   : $self->condition_analysis($anal);
    Function: Get/set method for the analysis which must be 'DONE' in order for
                the controlled analysis to be un-BLOCKED
    Returns : Bio::EnsEMBL::Hive::Analysis

Code:

condition_analysis_url()

public String Bio::EnsEMBL::Hive::AnalysisCtrlRule::condition_analysis_url

(

)

    Arg[1]  : (optional) string $url
    Usage   : $self->condition_analysis_url($url);
    Function: Get/set method for the analysis which must be 'DONE' in order for
                the controlled analysis to be un-BLOCKED. Specified as a URL.
    Returns : string

Code:

toString()

public String Bio::EnsEMBL::Hive::AnalysisCtrlRule::toString

(

)

    Args       : (none)
    Example    :

print $c_rule->toString()."\n";

    Description: returns a stringified representation of the rule
    Returntype : string

Code:

unikey()

public Bio::EnsEMBL::Hive::AnalysisCtrlRule::unikey

(

)

Undocumented method

Code:

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The documentation for this class was generated from the following file:

• modules/Bio/EnsEMBL/Hive/AnalysisCtrlRule.pm