Class Index

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A	CoreDBConnection (Bio::EnsEMBL::Hive::DBSQL)	HiveGeneric_conf (Bio::EnsEMBL::Hive::PipeConfig)	NakedTableAdaptor (Bio::EnsEMBL::Hive::DBSQL)	SqlCmd (Bio::EnsEMBL::Hive::RunnableDB)
	D	J	NotifyByEmail (Bio::EnsEMBL::Hive::RunnableDB)	SqlHealthcheck (Bio::EnsEMBL::Hive::RunnableDB)
Hive::Accumulator (Bio::EnsEMBL)			O	SqlSchemaAdaptor (Bio::EnsEMBL::Hive::DBSQL)
AccumulatorAdaptor (Bio::EnsEMBL::Hive::DBSQL)	DatabaseDumper (Bio::EnsEMBL::Hive::RunnableDB)	JobFactory (Bio::EnsEMBL::Hive::RunnableDB)		StatementHandle (Bio::EnsEMBL::Hive::DBSQL)
AddTogether (Bio::EnsEMBL::Hive::RunnableDB::LongMult)	Hive::DataflowRule (Bio::EnsEMBL)	L	ObjectAdaptor (Bio::EnsEMBL::Hive::DBSQL)	Hive::Utils::Stopwatch (Bio::EnsEMBL)
Hive::Analysis (Bio::EnsEMBL)	DataflowRuleAdaptor (Bio::EnsEMBL::Hive::DBSQL)		P	Hive::Storable (Bio::EnsEMBL)
AnalysisAdaptor (Bio::EnsEMBL::Hive::DBSQL)	DBAdaptor (Bio::EnsEMBL::Hive::DBSQL)	Hive::Limiter (Bio::EnsEMBL)		SystemCmd (Bio::EnsEMBL::Hive::RunnableDB)
Hive::AnalysisCtrlRule (Bio::EnsEMBL)	DBConnection (Bio::EnsEMBL::Hive::DBSQL)	Hive::Meadow::LOCAL (Bio::EnsEMBL)	Hive::Params (Bio::EnsEMBL)	T
AnalysisCtrlRuleAdaptor (Bio::EnsEMBL::Hive::DBSQL)	Hive::DependentOptions (Bio::EnsEMBL)	LogMessageAdaptor (Bio::EnsEMBL::Hive::DBSQL)	PartMultiply (Bio::EnsEMBL::Hive::RunnableDB::LongMult)
AnalysisDataAdaptor (Bio::EnsEMBL::Hive::DBSQL)	DigitFactory (Bio::EnsEMBL::Hive::RunnableDB::LongMult)	LongMult_conf (Bio::EnsEMBL::Hive::PipeConfig)	Hive::PipelineWideParameters (Bio::EnsEMBL)	TableDumperZipper_conf (Bio::EnsEMBL::Hive::PipeConfig)
Hive::AnalysisJob (Bio::EnsEMBL)	Dummy (Bio::EnsEMBL::Hive::RunnableDB)	LongMultSt_conf (Bio::EnsEMBL::Hive::PipeConfig)	PipelineWideParametersAdaptor (Bio::EnsEMBL::Hive::DBSQL)	U
AnalysisJobAdaptor (Bio::EnsEMBL::Hive::DBSQL)	E	LongMultWf_conf (Bio::EnsEMBL::Hive::PipeConfig)	Hive::Process (Bio::EnsEMBL)
Hive::AnalysisStats (Bio::EnsEMBL)		Hive::Meadow::LSF (Bio::EnsEMBL)	Q	Hive::Utils::URL (Bio::EnsEMBL)
AnalysisStatsAdaptor (Bio::EnsEMBL::Hive::DBSQL)	EnsemblGeneric_conf (Bio::EnsEMBL::Hive::PipeConfig)	M		Hive::URLFactory (Bio::EnsEMBL)
AnyCommands_conf (Bio::EnsEMBL::Hive::PipeConfig)	F		Hive::Queen (Bio::EnsEMBL)	Hive::Utils (Bio::EnsEMBL)
ApplyToDatabases_conf (Bio::EnsEMBL::Hive::PipeConfig)		Hive::Meadow (Bio::EnsEMBL)	R	V
B	FailureTest (Bio::EnsEMBL::Hive::RunnableDB)	MemlimitTest_conf (Bio::EnsEMBL::Hive::PipeConfig)
	FailureTest_conf (Bio::EnsEMBL::Hive::PipeConfig)	MetaAdaptor (Bio::EnsEMBL::Hive::DBSQL)	Hive::Utils::RedirectStack (Bio::EnsEMBL)	Hive::Valley (Bio::EnsEMBL)
BaseAdaptor (Bio::EnsEMBL::Hive::DBSQL)	FastaFactory (Bio::EnsEMBL::Hive::RunnableDB)	Hive::MetaParameters (Bio::EnsEMBL)	Hive::ResourceClass (Bio::EnsEMBL)	Hive::Version (Bio::EnsEMBL)
C	FastaSplitter_conf (Bio::EnsEMBL::Hive::PipeConfig)	MiniPecanMulti_conf	ResourceClassAdaptor (Bio::EnsEMBL::Hive::DBSQL)	W
	G	MiniPecanSingle2_conf	Hive::ResourceDescription (Bio::EnsEMBL)
Hive::Cacheable (Bio::EnsEMBL)		MiniPecanSingle3_conf	ResourceDescriptionAdaptor (Bio::EnsEMBL::Hive::DBSQL)	Hive::Worker (Bio::EnsEMBL)
Hive::Utils::Collection (Bio::EnsEMBL)	Hive::Utils::Graph (Bio::EnsEMBL)	MiniPecanSingle_conf	Hive::Role (Bio::EnsEMBL)
CompressFiles_conf (Bio::EnsEMBL::Hive::PipeConfig)	Hive::Utils::GraphViz (Bio::EnsEMBL)	MySQLTransfer (Bio::EnsEMBL::Hive::RunnableDB)	RoleAdaptor (Bio::EnsEMBL::Hive::DBSQL)
Hive::Utils::Config (Bio::EnsEMBL)	H	N	RunListOfCommandsOnFarm_conf (Bio::EnsEMBL::Hive::PipeConfig)
Hive::Configurable (Bio::EnsEMBL)			S
	Hive (Bio::EnsEMBL)	Hive::NakedTable (Bio::EnsEMBL)
			Hive::Scheduler (Bio::EnsEMBL)

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