#!/bin/bash

: "Required parameters
    - NAME_*   : should match that in the BAM file headers, primarily for naming of folders
    - *_MT     : Refers to the Tumour sample
    - *_WT     : Refers to the Wildtype/normal sample
    - TIMEZONE : Change this if you want the web tools to use your local timezone
                 This will give you the list:
                   perl -MDateTime -e 'print join "\n", DateTime::TimeZone->all_names;'
 "

NAME_MT='TUMOUR'
NAME_WT='NORMAL'
BAM_MT='/datastore/TUMOUR.bam'
BAM_WT='/datastore/NORMAL.bam'

TIMEZONE='Europe/London'